- Latex guide Latex writing guide
- Conda guide (updated) Updated conda workflow
- Eaton lab server guide New user setup
- Assembling a plant genome on google cloud gsutils, buckets, instances.
- Login to HPC passwordless Save yourself 30 seconds every day.
- Hosting a jupyterhub server on a static website For workshops, assignments, and demonstrations
- Eaton-lab HPC instructions Notes on using Columbia HPC resources for Eaton lab members.
- Conda installation guide for multiple kernels Setting up Py2, Py3, R, Julia, bash, and RevBayes kernels
- Accessing sequence data for reproducible science The tools to download sequence data from SRA are clunky. I wrote a convenient Python wrapper to make it a bit easier.
