Lab information

JupyterHub Server on Sacra

If you are an Eaton Lab member and your GitHub ID has been whitelisted you can connect to a notebook server on the sacra workstation from this link.

Lab Gitter

A chatroom for updates about projects and organization in the lab. Gitter is a particularly convenient way to share code snippets, and to link to github repositories. Feel free to pop-in and say Hi.

Tutorial slides

Jupyter SSH-tunneling slides

A short slideshow with tips on using ssh to connect to remote HPC and running a remote jupyter notebook server that you can interact with locally.

Toytree slides

A short tutorial on using the Python library toytree to create interactive HTML tree figures that can be embedded in jupyter notebooks, used in HTML slides like these (reveal.js), or saved as standard figures (e.g., SVG, PDF).